projects

Publications

• A novel HLA Class II presentation prediction algorithm deciphers immunogenic CD4 epitopes specific to KRAS G12C

• Nonlinear sequence similarity between the Xist and Rsx long noncoding RNAs suggests shared functions of tandem repeat domains

• Functional classification of long non-coding RNAs by k-mer content

• Kepler Photometry of Four Radio-Loud AGN in 2010-2012

Open Source Projects

• Understanding lncRNAs through kmer profiles

• Supervised and unsupervised domain labeling in lncRNAs

• LongTails - DeSeq2 in Julia for RNAseq and TCRseq

• Latent Class Regression via Gumbel-Softmax